The issue I'm having is if I have any of the mods in the upper group there (session stats -> Sec Arm Status), none of the sidepanel mods work, and custom battle loading screen doesn't work.
For example I've switched to Hakabase's Side Panels (Also now on 0.9.6.1 and pack 00): here is with Regen Assistant selected, Custom Battle Loading Screen is not selected as well.
versus Regen Assistant not selected
No matter which of the 4 side panels are selected, if I select any of that upper list of mods, I end up with the normal side panels.
I've also noticed that Stopwatch and Clock in Battle also don't appear either as well with the upper list.
I've tried the entire upper list with only one of the side panel mods selected one by one as well to try to isolate the issue and still have the issue.
I've also deleted preference.xml to see if that did anything.